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  UCSF arrow indicating deeper hierarchy A-Z Index of Webs arrow indicating deeper hierarchy U arrow indicating deeper hierarchyDepartment of Urology arrow indicating deeper hierarchyFaculty arrow indicating deeper hierarchy Colin Collins, PhD  
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Department of Urology

Colin Collins, PhD

Recent Publications

Publications – 2007

Hittelman, A., S. Sridharan, R. Roy, J. Fridlyand, M. Loda, C. Collins, and P.L. Paris, Evaluation of whole genome amplification protocols for array and oligonucleotide CGH. Diagn Mol Pathol, 2007. 16(4): p. 198-206.
Krzywinski, M., I. Bosdet, C. Mathewson, N. Wye, J. Brebner, R. Chiu, R. Corbett, M. Field, D. Lee, T. Pugh, S. Volik, A. Siddiqui, S. Jones, J. Schein, C. Collins, and M. Marra, A BAC clone fingerprinting approach to the detection of human genome rearrangements. Genome Biol, 2007. 8(10): p. R224.
Li, P., S. Maines-Bandiera, W.L. Kuo, Y. Guan, Y. Sun, M. Hills, G. Huang, C.C. Collins, P.C. Leung, J.W. Gray, and N. Auersperg, Multiple roles of the candidate oncogene ZNF217 in ovarian epithelial neoplastic progression. Int J Cancer, 2007.
Mosquera, J.M., S. Perner, F. Demichelis, R. Kim, M.D. Hofer, K.D. Mertz, P.L. Paris, J. Simko, C. Collins, T.A. Bismar, A.M. Chinnaiyan, and M.A. Rubin, Morphological features of TMPRSS2-ERG gene fusion prostate cancer. J Pathol, 2007. 212(1): p. 91-101.
Paris, P.L., S. Sridharan, A. Scheffer, A. Tsalenko, L. Bruhn, and C. Collins, High resolution oligonucleotide CGH using DNA from archived prostate tissue. Prostate, 2007. 67(13): p. 1447-55.

Perner, S., J.M. Mosquera, F. Demichelis, M.D. Hofer, P.L. Paris, J. Simko, C. Collins, T.A. Bismar, A.M. Chinnaiyan, A.M. De Marzo, and M.A. Rubin, TMPRSS2-ERG Fusion Prostate Cancer: An Early Molecular Event Associated With Invasion. Am J Surg Pathol, 2007. 31(6): p. 882-888.

 

Publications – 2006

Bussey, K.J., K. Chin, S. Lababidi, M. Reimers, W.C. Reinhold, W.L. Kuo, F. Gwadry, Ajay, H. Kouros-Mehr, J. Fridlyand, A. Jain, C. Collins, S. Nishizuka, G. Tonon, A. Roschke, K. Gehlhaus, I. Kirsch, D.A. Scudiero, J.W. Gray, and J.N. Weinstein, Integrating data on DNA copy number with gene expression levels and drug sensitivities in the NCI-60 cell line panel. Mol Cancer Ther, 2006. 5(4): p. 853-67.
Paris, P.L., M.D. Hofer, G. Albo, R. Kuefer, J.E. Gschwend, R.E. Hautmann, J. Fridyland, J. Simko, P.R. Carroll, M.A. Rubin, and C. Collins, Genomic profiling of hormone-naive lymph node metastases in patients with prostate cancer. Neoplasia, 2006. 8(12): p. 1083-9.
Rodriguez-Viciana, P., C. Collins, and M. Fried, Polyoma and SV40 proteins differentially regulate PP2A to activate distinct cellular signaling pathways involved in growth control. Proc Natl Acad Sci U S A, 2006. 103(51): p. 19290-5.
Roylance, R., P. Gorman, T. Papior, Y.L. Wan, M. Ives, J.E. Watson, C. Collins, N. Wortham, C. Langford, H. Fiegler, N. Carter, C. Gillett, P. Sasieni, S. Pinder, A. Hanby, and I. Tomlinson, A comprehensive study of chromosome 16q in invasive ductal and lobular breast carcinoma using array CGH. Oncogene, 2006.
Volik, S., B.J. Raphael, G. Huang, M.R. Stratton, G. Bignel, J. Murnane, J.H. Brebner, K. Bajsarowicz, P.L. Paris, Q. Tao, D. Kowbel, A. Lapuk, D.A. Shagin, I.A. Shagina, J.W. Gray, J.F. Cheng, P.J. de Jong, P. Pevzner, and C. Collins, Decoding the fine-scale structure of a breast cancer genome and transcriptome. Genome Res, 2006. 16(3): p. 394-404.